lcl|LHPG02000022.1_cds_PRW20597.1_5250 (PRW20597)

Aliases : PRW20597

Description : Threonine-tRNA chloroplastic mitochondrial 2

Gene families : OG_01_0001392 (OrthoFinder) Phylogenetic Tree(s): OG0001392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000022.1_cds_PRW20597.1_5250
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method	Actions
lcl\|VRMN01000001.1_cds_KAA8498025.1_6978	KAA8498025	Threonine--tRNA ligase, chloroplastic/mitochondrial 2	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002098	tRNA wobble uridine modification	IEP	Enrichment
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	Enrichment
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	Enrichment
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Enrichment
BP	GO:0006826	iron ion transport	IEP	Enrichment
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Enrichment
MF	GO:0009916	alternative oxidase activity	IEP	Enrichment
BP	GO:0010921	regulation of phosphatase activity	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Enrichment
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0016805	dipeptidase activity	IEP	Enrichment
MF	GO:0019208	phosphatase regulator activity	IEP	Enrichment
MF	GO:0019212	phosphatase inhibitor activity	IEP	Enrichment
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Enrichment
MF	GO:0019888	protein phosphatase regulator activity	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
CC	GO:0033588	elongator holoenzyme complex	IEP	Enrichment
BP	GO:0034311	diol metabolic process	IEP	Enrichment
BP	GO:0034312	diol biosynthetic process	IEP	Enrichment
BP	GO:0034755	iron ion transmembrane transport	IEP	Enrichment
BP	GO:0035303	regulation of dephosphorylation	IEP	Enrichment
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Enrichment
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Enrichment
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Enrichment
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	Enrichment
BP	GO:0046165	alcohol biosynthetic process	IEP	Enrichment
BP	GO:0046173	polyol biosynthetic process	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0051189	prosthetic group metabolic process	IEP	Enrichment
BP	GO:0051336	regulation of hydrolase activity	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002314	aa-tRNA-synt_IIb	257	462
IPR012947	tRNA_SAD	94	151
IPR004154	Anticodon-bd	475	561

External Links

No external refs found!

lcl|LHPG02000022.1_cds_PRW20597.1_5250 (PRW20597)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation