- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRW20953
Description : Thylakoid lumenal kDa chloroplastic
Gene families : OG_01_0003531 (OrthoFinder) Phylogenetic Tree(s): OG0003531_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000021.1_cds_PRW20953.1_5067 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz04g37150.t1 | No alias | TPM domain [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0017s0073.1 | 32891461 | TPM domain [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Enrichment |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| BP | GO:0006544 | glycine metabolic process | IEP | Enrichment |
| BP | GO:0006546 | glycine catabolic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0007034 | vacuolar transport | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Enrichment |
| CC | GO:0009512 | cytochrome b6f complex | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009522 | photosystem I | IEP | Enrichment |
| CC | GO:0009538 | photosystem I reaction center | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Enrichment |
| MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
| MF | GO:0045158 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | IEP | Enrichment |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007621 | TPM_dom | 80 | 173 |
| No external refs found! |