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  5. lcl|LHPG02000021.1_cds_PRW20912.1_5058

lcl|LHPG02000021.1_cds_PRW20912.1_5058 (PRW20912)


Aliases : PRW20912

Description : Beta-Ig-H3 fasciclin


Gene families : OG_01_0000134 (OrthoFinder) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000021.1_cds_PRW20912.1_5058
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Sro1410_g270280.1 Contig3492.g27091 Beta-induced protein ig-h3 0.01 OrthoFinder
Transcript_contig_67904 67904 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_79987 79987 FAS1 domain; LysM domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58312.1_7906 PRW58312 Beta-Ig-H3 fasciclin 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
InterPro domains Description Start Stop
IPR000782 FAS1_domain 56 163
IPR000782 FAS1_domain 255 384
No external refs found!