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  5. lcl|LHPG02000019.1_cds_PRW32652.1_3919

lcl|LHPG02000019.1_cds_PRW32652.1_3919 (PRW32652)


Aliases : PRW32652

Description : Transcription factor TFIIIB component B


Gene families : OG_01_0004977 (OrthoFinder) Phylogenetic Tree(s): OG0004977_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000019.1_cds_PRW32652.1_3919
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre15.g640800 30783541 RNA biosynthesis.RNA polymerase III-dependent... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR039467 TFIIIB_B''_Myb 542 624
No external refs found!