Aliases : PRW32583
Description : 50S ribosomal L27
Gene families : OG_01_0000894 (OrthoFinder) Phylogenetic Tree(s): OG0000894_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000019.1_cds_PRW32583.1_3993 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021428.4 | tig00021428_g21145.t1 | 50S ribosomal protein L27, chloroplastic OS=Nicotiana tabacum | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00022075.47 | tig00022075_g23608.t1 | 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea | 0.06 | OrthoFinder | |
Cre06.g300800 | 30778964, PRPL27 | 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana | 0.2 | OrthoFinder | |
Cz08g09200.t1 | No alias | Ribosomal protein L27 [Interproscan]. | 0.14 | OrthoFinder | |
Dusal.1029s00008.1 | 33196318 | Ribosomal protein L27 [Interproscan]. | 0.04 | OrthoFinder | |
OT_07G01560.1 | No alias | Ribosomal protein L27 [Interproscan]. | 0.14 | OrthoFinder | |
Sro1328_g263130.1 | Contig1099.g10653 | Protein L27 | 0.02 | OrthoFinder | |
Sro51_chlor_g029890.1 | Rpl27 | Rpl27 | 0.06 | OrthoFinder | |
SymbC1.scaffold9.69 | 9.69 | EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
TPCG01990.1 | No alias | Ribosomal protein L27 [Interproscan]. | 0.03 | OrthoFinder | |
TPCG03010.1 | No alias | Ribosomal protein L27 [Interproscan]. | 0.03 | OrthoFinder | |
Transcript_contig_89636 | 89636 | Ribosomal protein L27 [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0001s0304.1 | 32885658 | Ribosomal protein L27 [Interproscan]. | 0.05 | OrthoFinder | |
XM_002499554.1 | MICPUN_56110, 56110 | Ribosomal protein L27 (RPL27) | 0.06 | OrthoFinder | |
lcl|BLLF01003179.1_cds_GFH26609.1_21086 | HaLaN_24785, GFH26609 | 50S ribosomal protein L27 | 0.07 | OrthoFinder | |
lcl|BLLF01003289.1_cds_GFH26922.1_21399 | HaLaN_25156, GFH26922 | 50S ribosomal protein L27 | 0.02 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56434.1_9704 | PRW56434 | 50S ribosomal L27 isoform A | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
MF | GO:0004556 | alpha-amylase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0006415 | translational termination | IEP | Enrichment |
BP | GO:0006754 | ATP biosynthetic process | IEP | Enrichment |
MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Enrichment |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Enrichment |
CC | GO:0009507 | chloroplast | IEP | Enrichment |
CC | GO:0009512 | cytochrome b6f complex | IEP | Enrichment |
CC | GO:0009521 | photosystem | IEP | Enrichment |
CC | GO:0009523 | photosystem II | IEP | Enrichment |
CC | GO:0009536 | plastid | IEP | Enrichment |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
BP | GO:0015979 | photosynthesis | IEP | Enrichment |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Enrichment |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Enrichment |
MF | GO:0016160 | amylase activity | IEP | Enrichment |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Enrichment |
BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001684 | Ribosomal_L27 | 40 | 118 |
No external refs found! |