lcl|LHPG02000019.1_cds_PRW32487.1_3908 (PRW32487)

Aliases : PRW32487

Description : Squamosa promoter-binding 8

Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000019.1_cds_PRW32487.1_3908
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method	Actions
Vocar.0003s0435.1	32889022	SBP domain [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004334	fumarylacetoacetase activity	IEP	Enrichment
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006302	double-strand break repair	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Enrichment
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Enrichment
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
MF	GO:0050897	cobalt ion binding	IEP	Enrichment
BP	GO:0051202	phytochromobilin metabolic process	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	43	116

External Links

No external refs found!