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  5. lcl|LHPG02000018.1_cds_PRW32950.1_3883

lcl|LHPG02000018.1_cds_PRW32950.1_3883 (PRW32950)


Aliases : PRW32950

Description : Cell division cycle 20 isoform B


Gene families : OG_01_0000709 (OrthoFinder) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000018.1_cds_PRW32950.1_3883
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Dusal.0396s00002.1 33198517 WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.02 OrthoFinder
OT_04G04640.1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.06 OrthoFinder
PTI_00G03470.1 No alias Anaphase-promoting complex subunit 4, WD40 domain;... 0.01 OrthoFinder
PTI_09G00700.1 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
Sro589_g171680.1 Contig2898.g23105 Cycle protein 20 homolog 0.02 OrthoFinder
XM_002502541.1 MICPUN_97422, 97422 Anaphase promoting complex protein (CDC20) 0.04 OrthoFinder
lcl|BLLF01003044.1_cds_GFH26172.1_20649 HaLaN_24273, GFH26172 Cell division cycle protein 20 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 172 232
IPR001680 WD40_repeat 256 291
IPR001680 WD40_repeat 390 424
IPR001680 WD40_repeat 297 334
No external refs found!