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  5. lcl|LHPG02000018.1_cds_PRW32871.1_3790

lcl|LHPG02000018.1_cds_PRW32871.1_3790 (PRW32871)


Aliases : PRW32871

Description : Zinc finger family isoform B


Gene families : OG_01_0000371 (OrthoFinder) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000018.1_cds_PRW32871.1_3790
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cz01g15240.t1 No alias Hypothetical protein 0.02 OrthoFinder
Transcript_contig_188 188 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_55832 55832 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_55959 55959 Ankyrin repeat-containing domain; Ankyrin repeats (many... 0.02 OrthoFinder
UNPLg00167.t1 No alias Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 103 125
No external refs found!