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  5. lcl|LHPG02000018.1_cds_PRW32853.1_3873

lcl|LHPG02000018.1_cds_PRW32853.1_3873 (PRW32853)


Aliases : PRW32853

Description : Vacuolar sorting-associated 36 isoform B


Gene families : OG_01_0003690 (OrthoFinder) Phylogenetic Tree(s): OG0003690_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000018.1_cds_PRW32853.1_3873
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cz04g29170.t1 No alias Snf8/Vps36 family; Ubiquitin-associated domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
CC GO:0070449 elongin complex IEP Enrichment
InterPro domains Description Start Stop
IPR040608 Snf8/Vps36 376 661
No external refs found!