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  5. lcl|LHPG02000017.1_cds_PRW33318.1_3464

lcl|LHPG02000017.1_cds_PRW33318.1_3464 (PRW33318)


Aliases : PRW33318

Description : Low-CO2 inducible


Gene families : OG_01_0000299 (OrthoFinder) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000017.1_cds_PRW33318.1_3464
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021795.19 tig00021795_g23537.t1 No description available 0.03 OrthoFinder
Cre04.g223250 30791159, LCIE No description available 0.02 OrthoFinder
Cre06.g307500 30779446, LCIC No description available 0.04 OrthoFinder
Cre10.g452800 30790505, LCIB No description available 0.03 OrthoFinder
PTI_01G11240.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
Sro520_g159080.1 Contig2679.g21664 Low-co2 inducible protein 0.02 OrthoFinder
lcl|BLLF01001548.1_cds_GFH19961.1_14438 HaLaN_17001, GFH19961 LCIB_C_CA domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33563.1_3375 PRW33563 Low-CO2 inducible 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR040703 LCIB/C_CA 110 346
IPR040703 LCIB/C_CA 583 819
No external refs found!