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  5. lcl|LHPG02000017.1_cds_PRW33253.1_3523

lcl|LHPG02000017.1_cds_PRW33253.1_3523 (PRW33253)


Aliases : PRW33253

Description : WD repeat and HMG-box DNA-binding 1


Gene families : OG_01_0001835 (OrthoFinder) Phylogenetic Tree(s): OG0001835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000017.1_cds_PRW33253.1_3523
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.19 tig00020780_g13772.t1 No description available 0.06 OrthoFinder
Cre16.g652950 30777774 No description available 0.08 OrthoFinder
Cz16g01010.t1 No alias Minichromosome loss protein Mcl1, middle region; WD40... 0.05 OrthoFinder
EOD24691 No alias WD40 repeat; Minichromosome loss protein Mcl1, middle... 0.03 OrthoFinder
OT_17G00940.1 No alias Minichromosome loss protein Mcl1, middle region; WD40... 0.02 OrthoFinder
PTI_22G02380.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.04 OrthoFinder
PTI_22G02400.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.03 OrthoFinder
TP09G01570.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56687 56687 Minichromosome loss protein Mcl1, middle region; WD40... 0.06 OrthoFinder
XM_002508806.1 MICPUN_62102, 62102 Minichromosome loss protein Mcl1, middle region; WD40... 0.04 OrthoFinder
XM_003063935.1 MicpuC2_36835, 36835 Minichromosome loss protein Mcl1, middle region; WD40... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 111 134
IPR001680 WD40_repeat 242 271
IPR022100 Mcl1_mid 406 691
No external refs found!