1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000017.1_cds_PRW33235.1_3637

lcl|LHPG02000017.1_cds_PRW33235.1_3637 (PRW33235)


Aliases : PRW33235

Description : Nucleolar GTP-binding isoform B


Gene families : OG_01_0000915 (OrthoFinder) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000017.1_cds_PRW33235.1_3637
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.35 tig00021432_g21227.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cz08g30270.t1 No alias NOG, C-terminal; Nucleolar GTP-binding protein 1,... 0.05 OrthoFinder
Dusal.0556s00014.1 33195349 NOG1, N-terminal helical domain; Nucleolar GTP-binding... 0.05 OrthoFinder
Dusal.0556s00015.1 33195341 NOG, C-terminal [Interproscan]. 0.07 OrthoFinder
EOD04385 No alias NOG, C-terminal; NOG1, N-terminal helical domain;... 0.04 OrthoFinder
OT_01G02430.1 No alias FeoB-type guanine nucleotide-binding (G) domain; NOG1,... 0.02 OrthoFinder
PTI_22G01420.1 No alias Nucleolar GTP-binding protein 1, Rossman-fold domain;... 0.02 OrthoFinder
Sro789_g202710.1 Contig1895.g16487 Nucleolar GTP-binding protein 1 0.03 OrthoFinder
TP03G08460.1 No alias Nucleolar GTP-binding protein 1, Rossman-fold domain;... 0.02 OrthoFinder
Transcript_contig_56581 56581 NOG, C-terminal; NOG1, N-terminal helical domain;... 0.04 OrthoFinder
XM_002503141.1 MICPUN_83165, 83165 NOG, C-terminal; Nucleolar GTP-binding protein 1,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR010674 NOG1_Rossman_fold_dom 252 309
IPR041623 NOG1_N 5 182
IPR012973 NOG_C 427 480
No external refs found!