lcl|LHPG02000017.1_cds_PRW33163.1_3430 (PRW33163)

Aliases : PRW33163

Description : Vacuolar sorting-associated 35B-like

Gene families : OG_01_0002646 (OrthoFinder) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000017.1_cds_PRW33163.1_3430
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
EOD34589	No alias	Vacuolar protein sorting protein 35 [Ensembl].	0.04	OrthoFinder
EOD34616	No alias	Vacuolar protein sorting-associated protein 35 [Interproscan].	0.05	OrthoFinder
Sro37_g023370.1	Contig1425.g13153	Protein sorting-associated protein 35	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
CC	GO:0030906	retromer, cargo-selective complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042147	retrograde transport, endosome to Golgi	IEA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Enrichment
MF	GO:0004519	endonuclease activity	IEP	Enrichment
CC	GO:0005667	transcription regulator complex	IEP	Enrichment
CC	GO:0005669	transcription factor TFIID complex	IEP	Enrichment
BP	GO:0006302	double-strand break repair	IEP	Enrichment
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005378	Vps35	14	758

External Links

No external refs found!