Aliases : PRW33144
Description : Carotene isomerase
Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000017.1_cds_PRW33144.1_3623 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001095.9 | tig00001095_g7025.t1 | Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00001258.10 | tig00001258_g7832.t1 | No description available | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00020723.8 | tig00020723_g13427.t1 | No description available | 0.02 | OrthoFinder | |
Cre09.g407200 | 30780595 | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.04 | OrthoFinder | |
Cre16.g651923 | 30776797 | Secondary metabolism.terpenoids.terpenoid... | 0.03 | OrthoFinder | |
PTI_01G08810.1 | No alias | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.05 | OrthoFinder | |
PTI_07G01440.1 | No alias | Amine oxidase [Interproscan]. | 0.04 | OrthoFinder | |
Sro1228_g254380.1 | Contig2695.g21739 | Prolycopene isomerase, chloroplastic | 0.03 | OrthoFinder | |
Sro1649_g288630.1 | Contig3529.g27273 | Prolycopene isomerase, chloroplastic | 0.02 | OrthoFinder | |
Sro2485_g328970.1 | Contig802.g8984 | Prolycopene isomerase, chloroplastic | 0.03 | OrthoFinder | |
TP05G02600.1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
TP15G02230.1 | No alias | NAD(P)-binding Rossmann-like domain; Amine oxidase... | 0.02 | OrthoFinder | |
Transcript_contig_2488 | 2488 | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_78738 | 78738 | Hypothetical protein | 0.02 | OrthoFinder | |
Vocar.0032s0058.1 | 32893700 | Amine oxidase [Interproscan]. | 0.04 | OrthoFinder | |
XM_002503327.1 | MICPUN_113305, 113305 | FAD dependent oxidoreductase | 0.02 | OrthoFinder | |
XM_002506999.1 | MICPUN_92711, 92711 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
XM_003054830.1 | MicpuC2_50019, 50019 | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.02 | OrthoFinder | |
lcl|BLLF01000127.1_cds_GFH07954.1_2431 | HaLaN_02839, GFH07954 | Prolycopene isomerase, chloroplastic | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Enrichment |
MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Enrichment |
MF | GO:0004470 | malic enzyme activity | IEP | Enrichment |
MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Enrichment |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
BP | GO:0007034 | vacuolar transport | IEP | Enrichment |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
MF | GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | IEP | Enrichment |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
MF | GO:0016615 | malate dehydrogenase activity | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Enrichment |
MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
BP | GO:0019321 | pentose metabolic process | IEP | Enrichment |
BP | GO:0019346 | transsulfuration | IEP | Enrichment |
BP | GO:0019566 | arabinose metabolic process | IEP | Enrichment |
MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
BP | GO:0046373 | L-arabinose metabolic process | IEP | Enrichment |
MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Enrichment |
BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
No external refs found! |