1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000017.1_cds_PRW33120.1_3586

lcl|LHPG02000017.1_cds_PRW33120.1_3586 (PRW33120)


Aliases : PRW33120

Description : U1 small nuclear ribonucleo C


Gene families : OG_01_0004486 (OrthoFinder) Phylogenetic Tree(s): OG0004486_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000017.1_cds_PRW33120.1_3586
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.55 tig00020553_g10543.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder
Dusal.0389s00014.1 33193618 U1-C, C2H2-type zinc finger [Interproscan]. 0.01 OrthoFinder
PTI_08G02080.1 No alias WW domain; U1-C, C2H2-type zinc finger [Interproscan]. 0.02 OrthoFinder
TP02G04040.1 No alias WW domain; U1-C, C2H2-type zinc finger [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013085 U1-CZ_Znf_C2H2 1 38
No external refs found!