1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000571.51

Cpa|evm.model.tig00000571.51 (tig00000571_g2203.t1)


Aliases : tig00000571_g2203.t1

Description : Transcription elongation factor TFIIS OS=Arabidopsis thaliana


Gene families : OG_01_0000595 (OrthoFinder) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000571.51
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Dusal.0201s00011.1 33186087 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_176 176 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_79835 79835 Transcription elongation factor S-II, central domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
InterPro domains Description Start Stop
IPR003618 TFIIS_cen_dom 14 91
IPR001222 Znf_TFIIS 106 144
No external refs found!