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  5. lcl|LHPG02000016.1_cds_PRW33651.1_3248

lcl|LHPG02000016.1_cds_PRW33651.1_3248 (PRW33651)


Aliases : PRW33651

Description : Soluble starch synthase


Gene families : OG_01_0000642 (OrthoFinder) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000016.1_cds_PRW33651.1_3248
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre16.g663850 30778255, SSS5 Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder
Cz08g27030.t1 No alias Starch synthase, catalytic domain; Carbohydrate binding... 0.02 OrthoFinder
lcl|BLLF01000636.1_cds_GFH13657.1_8134 HaLaN_09586, GFH13657 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 169 425
IPR001296 Glyco_trans_1 491 643
No external refs found!