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  5. lcl|LHPG02000016.1_cds_PRW33615.1_3369

lcl|LHPG02000016.1_cds_PRW33615.1_3369 (PRW33615)


Aliases : PRW33615

Description : Ribonuclease E G chloroplastic


Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000016.1_cds_PRW33615.1_3369
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Vocar.0015s0256.1 32899092 Carbohydrate binding module family 20 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008792 arginine decarboxylase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002044 CBM_fam20 502 586
IPR001810 F-box_dom 7 49
No external refs found!