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  5. lcl|LHPG02000015.1_cds_PRW34058.1_2865

lcl|LHPG02000015.1_cds_PRW34058.1_2865 (PRW34058)


Aliases : PRW34058

Description : Transport SEC31-like protein B isoform B


Gene families : OG_01_0001224 (OrthoFinder) Phylogenetic Tree(s): OG0001224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000015.1_cds_PRW34058.1_2865
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Dusal.0345s00008.1 33198546 Hypothetical protein 0.01 OrthoFinder
EOD17074 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
Sro358_g125970.1 Contig1210.g11384 Transport protein SEC31 0.02 OrthoFinder
XM_002503929.1 MICPUN_101511, 101511 RNA recognition motif domain; WD40 repeat; Ancestral... 0.01 OrthoFinder
lcl|BLLF01003617.1_cds_GFH27783.1_22260 HaLaN_26163, GFH27783 WD_REPEATS_REGION domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495788.1_1786 KAA8495788 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 121 159
IPR009917 SRA1/Sec31 1180 1313
No external refs found!