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  5. lcl|LHPG02000015.1_cds_PRW34046.1_2968

lcl|LHPG02000015.1_cds_PRW34046.1_2968 (PRW34046)


Aliases : PRW34046

Description : BEACH domain-containing lvsC isoform X1 isoform A


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000015.1_cds_PRW34046.1_2968
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
OT_04G03470.1 No alias PH-BEACH domain; Domain of unknown function DUF4704;... 0.02 OrthoFinder
OT_06G01490.1 No alias PH-BEACH domain; BEACH domain [Interproscan]. 0.03 OrthoFinder
Sro1730_g294110.1 Contig2449.g20048 Lipopolysaccharide-responsive and beige-like anchor protein 0.02 OrthoFinder
XM_002503222.1 MICPUN_82791, 82791 BEACH domain; WD40 repeat; PH-BEACH domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2488 2784
IPR031570 DUF4704 1171 1353
IPR023362 PH-BEACH_dom 2328 2464
IPR001680 WD40_repeat 3007 3035
IPR001680 WD40_repeat 2950 2980
No external refs found!