lcl|LHPG02000015.1_cds_PRW34030.1_2822 (PRW34030)


Aliases : PRW34030

Description : Ankyrin repeat-containing domain [Interproscan].


Gene families : OG_01_0001891 (OrthoFinder) Phylogenetic Tree(s): OG0001891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000015.1_cds_PRW34030.1_2822
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
OT_06G00470.1 No alias Uncharacterised protein family UPF0047 [Interproscan]. 0.04 OrthoFinder
Sro580_g170150.1 Contig2039.g17530 UPF0047 protein YjbQ 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 606 660
IPR020683 Ankyrin_rpt-contain_dom 327 413
IPR020683 Ankyrin_rpt-contain_dom 428 492
IPR020683 Ankyrin_rpt-contain_dom 157 234
No external refs found!