lcl|LHPG02000015.1_cds_PRW33797.1_2958 (PRW33797)

Aliases : PRW33797

Description : RAP domain

Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000015.1_cds_PRW33797.1_2958
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
Cz08g16170.t1	No alias	Hypothetical protein	0.02	OrthoFinder
EOD31523	No alias	RAP domain [Interproscan].	0.03	OrthoFinder
Vocar.0002s0298.1	32890816	Hypothetical protein	0.04	OrthoFinder
Vocar.0021s0202.1	32895945	RAP domain [Interproscan].	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496604.1_333	KAA8496604	Tbc2 translation factor, chloroplastic	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010608	posttranscriptional regulation of gene expression	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0043487	regulation of RNA stability	None	Extended
BP	GO:0043488	regulation of mRNA stability	None	Extended
BP	GO:0044528	regulation of mitochondrial mRNA stability	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061013	regulation of mRNA catabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903311	regulation of mRNA metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
MF	GO:0015298	solute:cation antiporter activity	IEP	Enrichment
MF	GO:0015299	solute:proton antiporter activity	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
BP	GO:0051259	protein complex oligomerization	IEP	Enrichment
BP	GO:0051260	protein homooligomerization	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010622	FAST_Leu-rich	320	370
IPR013584	RAP	1058	1115

External Links

No external refs found!