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  5. lcl|LHPG02000014.1_cds_PRW39359.1_2598

lcl|LHPG02000014.1_cds_PRW39359.1_2598 (PRW39359)


Aliases : PRW39359

Description : ALBINO3 chloroplastic isoform A


Gene families : OG_01_0001006 (OrthoFinder) Phylogenetic Tree(s): OG0001006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000014.1_cds_PRW39359.1_2598
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre06.g251900 30780063, ALB3 Protein translocation.chloroplast.thylakoid membrane SRP... 0.03 OrthoFinder
Cre17.g729800 30781893 Protein translocation.chloroplast.thylakoid membrane SRP... 0.04 OrthoFinder
EOD05958 No alias Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000322.1_cds_GFH10511.1_4988 HaLaN_05837, GFH10511 Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0032977 membrane insertase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001708 YidC/ALB3/OXA1/COX18 150 358
No external refs found!