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  5. lcl|LHPG02000014.1_cds_PRW39331.1_2626

lcl|LHPG02000014.1_cds_PRW39331.1_2626 (PRW39331)


Aliases : PRW39331

Description : Tbc2 translation chloroplastic


Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000014.1_cds_PRW39331.1_2626
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
EOD36473 No alias RAP domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1582.1 1582.1 RNA recognition motif domain; RAP domain [Interproscan]. 0.01 OrthoFinder
Vocar.0020s0010.1 32886796 RAP domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01003161.1_cds_GFH26543.1_21020 HaLaN_24711, GFH26543 RAP domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
InterPro domains Description Start Stop
IPR013584 RAP 171 219
No external refs found!