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  5. lcl|LHPG02000014.1_cds_PRW39211.1_2644

lcl|LHPG02000014.1_cds_PRW39211.1_2644 (PRW39211)


Aliases : PRW39211

Description : Serine arginine-rich splicing factor RS40-like isoform X1 isoform A


Gene families : OG_01_0004539 (OrthoFinder) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000014.1_cds_PRW39211.1_2644
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000852.9 tig00000852_g5022.t1 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Dusal.0462s00011.1 33197495 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 6 61
IPR000504 RRM_dom 97 159
No external refs found!