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  5. lcl|LHPG02000014.1_cds_PRW39147.1_2649

lcl|LHPG02000014.1_cds_PRW39147.1_2649 (PRW39147)


Aliases : PRW39147

Description : 50S ribosomal chloroplastic-like


Gene families : OG_01_0000944 (OrthoFinder) Phylogenetic Tree(s): OG0000944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000014.1_cds_PRW39147.1_2649
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre02.g108850 30784955, PRPL17 Protein biosynthesis.organelle translation... 0.07 OrthoFinder
OT_01G06040.1 No alias Ribosomal protein L17 [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold1290.1 1290.1 Ribosomal protein L17 [Interproscan]. 0.04 OrthoFinder
Vocar.0008s0070.1 32897191 Ribosomal protein L17 [Interproscan]. 0.05 OrthoFinder
XM_003062771.1 MicpuC2_29418, 29418 Ribosomal protein L17 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002996.1_cds_GFH26033.1_20510 HaLaN_24106, GFH26033 Ribosomal protein L17 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0004197 cysteine-type endopeptidase activity IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0071586 CAAX-box protein processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Enrichment
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 20 116
IPR003675 Rce1-like 331 411
No external refs found!