- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRW39086
Description : Structure-specific recognition
Gene families : OG_01_0006230 (OrthoFinder) Phylogenetic Tree(s): OG0006230_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000014.1_cds_PRW39086.1_2651 | |
| Cluster | HCCA: Cluster_77 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dusal.0045s00027.1 | 33191625 | Domain of unknown function DUF1747 [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0001s1092.1 | 32885735 | Domain of unknown function DUF1747 [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000409.1_cds_GFH11499.1_5976 | HaLaN_07006, GFH11499 | Secretory carrier-associated membrane protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005516 | calmodulin binding | IEP | Enrichment |
| CC | GO:0005892 | acetylcholine-gated channel complex | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| CC | GO:0034702 | ion channel complex | IEP | Enrichment |
| CC | GO:0043235 | receptor complex | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
| CC | GO:0098802 | plasma membrane signaling receptor complex | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Enrichment |
| CC | GO:1990351 | transporter complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013719 | DUF1747 | 239 | 322 |
| No external refs found! |