lcl|LHPG02000014.1_cds_PRW39070.1_2553 (PRW39070)

Aliases : PRW39070

Description : DNA-binding SMUBP-2 isoform C

Gene families : OG_01_0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000014.1_cds_PRW39070.1_2553
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method	Actions
lcl\|BLLF01000632.1_cds_GFH13611.1_8088	HaLaN_09536, GFH13611	RUN domain-containing protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004556	alpha-amylase activity	IEP	Enrichment
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Enrichment
MF	GO:0016160	amylase activity	IEP	Enrichment
BP	GO:0051259	protein complex oligomerization	IEP	Enrichment
BP	GO:0051260	protein homooligomerization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041677	DNA2/NAM7_AAA_11	380	600
IPR001374	R3H_dom	50	91
IPR041679	DNA2/NAM7-like_C	607	735
IPR041679	DNA2/NAM7-like_C	739	818

External Links

No external refs found!