lcl|LHPG02000014.1_cds_PRW39060.1_2535 (PRW39060)

Aliases : PRW39060

Description : Abc transporter G family

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000014.1_cds_PRW39060.1_2535
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020685.31	tig00020685_g12947.t1	ABC transporter G family member 22 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00020902.3	tig00020902_g14946.t1	ABC transporter G family member 5 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder
Transcript_contig_89293	89293	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0008272	sulfate transport	IEP	Enrichment
MF	GO:0008509	anion transmembrane transporter activity	IEP	Enrichment
BP	GO:0009439	cyanate metabolic process	IEP	Enrichment
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015698	inorganic anion transport	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
BP	GO:0072348	sulfur compound transport	IEP	Enrichment
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	321	471
IPR013525	ABC_2_trans	611	818

External Links

No external refs found!