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  5. lcl|LHPG02000013.1_cds_PRW44394.1_2356

lcl|LHPG02000013.1_cds_PRW44394.1_2356 (PRW44394)


Aliases : PRW44394

Description : Transmembrane 9 superfamily member 4


Gene families : OG_01_0000275 (OrthoFinder) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|LHPG02000013.1_cds_PRW44394.1_2356
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000829.11 tig00000829_g4654.t1 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre10.g439850 30789940 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder
Dusal.0201s00001.1 33186088 Nonaspanin (TM9SF) [Interproscan]. 0.02 OrthoFinder
EOD14995 No alias Nonaspanin (TM9SF) [Interproscan]. 0.04 OrthoFinder
EOD26835 No alias Nonaspanin (TM9SF) [Interproscan]. 0.03 OrthoFinder
EOD28142 No alias Nonaspanin (TM9SF) [Interproscan]. 0.04 OrthoFinder
EOD32416 No alias Nonaspanin (TM9SF) [Interproscan]. 0.02 OrthoFinder
EOD36324 No alias Nonaspanin (TM9SF) [Interproscan]. 0.02 OrthoFinder
PTI_09G02180.1 No alias Nonaspanin (TM9SF) [Interproscan]. 0.04 OrthoFinder
PTI_14G02110.1 No alias Nonaspanin (TM9SF) [Interproscan]. 0.03 OrthoFinder
Sro482_g151770.1 Contig232.g2787 Transmembrane 9 superfamily member 0.02 OrthoFinder
Sro752_g197170.1 Contig1730.g15441 Transmembrane 9 superfamily 0.02 OrthoFinder
Sro846_g210160.1 Contig3685.g28432 Transmembrane 9 superfamily 0.03 OrthoFinder
Vocar.0001s1292.1 32884926 Nonaspanin (TM9SF) [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000073.1_cds_GFH07080.1_1557 HaLaN_01831, GFH07080 Transmembrane 9 superfamily member 0.03 OrthoFinder
lcl|BLLF01000222.1_cds_GFH09283.1_3760 HaLaN_04392, GFH09283 Transmembrane 9 superfamily member 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004664 prephenate dehydratase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR004240 EMP70 54 634
No external refs found!