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  5. lcl|LHPG02000013.1_cds_PRW44357.1_2087

lcl|LHPG02000013.1_cds_PRW44357.1_2087 (PRW44357)


Aliases : PRW44357

Description : Histone deacetylase


Gene families : OG_01_0000505 (OrthoFinder) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000013.1_cds_PRW44357.1_2087
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.44 tig00000215_g18663.t1 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
lcl|BLLF01004223.1_cds_GFH29185.1_23662 HaLaN_27810, GFH29185 Histone deacetylase 1/2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006470 protein dephosphorylation IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 172 463
No external refs found!