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  5. lcl|LHPG02000012.1_cds_PRW45145.1_1830

lcl|LHPG02000012.1_cds_PRW45145.1_1830 (PRW45145)


Aliases : PRW45145

Description : Putative DNA helicase MCM8 isoform X1


Gene families : OG_01_0003539 (OrthoFinder) Phylogenetic Tree(s): OG0003539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW45145.1_1830
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre16.g665950 30776795, MCM8 Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.04 OrthoFinder
Cz03g22010.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. 0.04 OrthoFinder
OT_12G00950.1 No alias MCM, AAA-lid domain; MCM domain; MCM OB domain [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 384 595
IPR041562 MCM_lid 656 739
IPR033762 MCM_OB 141 267
No external refs found!