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  5. lcl|LHPG02000012.1_cds_PRW45083.1_1914

lcl|LHPG02000012.1_cds_PRW45083.1_1914 (PRW45083)


Aliases : PRW45083

Description : Bromodomain and WD repeat-containing 1-like


Gene families : OG_01_0004368 (OrthoFinder) Phylogenetic Tree(s): OG0004368_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW45083.1_1914
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56036 56036 WD40 repeat [Interproscan]. 0.03 OrthoFinder
Vocar.0009s0134.1 32893418 WD40 repeat; Bromodomain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 326 363
IPR001487 Bromodomain 1697 1759
IPR001680 WD40_repeat 540 577
IPR001680 WD40_repeat 630 666
IPR001680 WD40_repeat 849 881
IPR001680 WD40_repeat 584 618
No external refs found!