lcl|LHPG02000012.1_cds_PRW45060.1_2016 (PRW45060)

Aliases : PRW45060

Description : HD-domain PDEase isoform B

Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000012.1_cds_PRW45060.1_2016
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000507.31	tig00000507_g1786.t1	No description available	0.01	OrthoFinder
Cpa\|evm.model.tig00020903.54	tig00020903_g15123.t1	No description available	0.02	OrthoFinder
Cre02.g143500	30785675	No description available	0.04	OrthoFinder
SymbC1.scaffold3035.1	3035.1	3'5'-cyclic nucleotide phosphodiesterase, catalytic...	0.03	OrthoFinder
SymbC1.scaffold3680.3	3680.3	3'5'-cyclic nucleotide phosphodiesterase, catalytic...	0.01	OrthoFinder
lcl\|BLLF01000175.1_cds_GFH08655.1_3132	HaLaN_03648, GFH08655	3'5'-cyclic nucleotide phosphodiesterase	0.02	OrthoFinder
lcl\|BLLF01000369.1_cds_GFH11052.1_5529	HaLaN_06484, GFH11052	Phosphodiesterase	0.02	OrthoFinder
lcl\|BLLF01002121.1_cds_GFH22778.1_17255	HaLaN_20290, GFH22778	3'5'-cyclic nucleotide phosphodiesterase	0.01	OrthoFinder
lcl\|BLLF01005160.1_cds_GFH30817.1_25294	HaLaN_29739, GFH30817	Phosphodiesterase	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	None	Extended
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003909	DNA ligase activity	IEP	Enrichment
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Enrichment
BP	GO:0006310	DNA recombination	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0051259	protein complex oligomerization	IEP	Enrichment
BP	GO:0051260	protein homooligomerization	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002073	PDEase_catalytic_dom	797	1051

External Links

No external refs found!