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  5. lcl|LHPG02000012.1_cds_PRW45035.1_1994

lcl|LHPG02000012.1_cds_PRW45035.1_1994 (PRW45035)


Aliases : PRW45035

Description : Homeodomain


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW45035.1_1994
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.48 tig00020780_g13797.t2 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder
Cz10g17100.t1 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Dusal.0223s00024.1 33201359 SANT/Myb domain [Interproscan]. 0.03 OrthoFinder
Dusal.0270s00001.1 33190010 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
EOD38518 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
OT_05G01310.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
OT_09G00440.1 No alias SANT/Myb domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55654 55654 SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0016556 mRNA modification IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0080009 mRNA methylation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR026992 DIOX_N 159 280
IPR001005 SANT/Myb 506 552
IPR001005 SANT/Myb 610 653
IPR001005 SANT/Myb 558 604
IPR002833 PTH2 30 142
IPR005123 Oxoglu/Fe-dep_dioxygenase 330 439
No external refs found!