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  5. lcl|LHPG02000012.1_cds_PRW44947.1_2049

lcl|LHPG02000012.1_cds_PRW44947.1_2049 (PRW44947)


Aliases : PRW44947

Description : Squamosa promoter binding-like 5


Gene families : OG_01_0004248 (OrthoFinder) Phylogenetic Tree(s): OG0004248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000012.1_cds_PRW44947.1_2049
Cluster HCCA: Cluster_89


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016073 snRNA metabolic process IEP Enrichment
BP GO:0016180 snRNA processing IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
BP GO:0034472 snRNA 3'-end processing IEP Enrichment
BP GO:0034477 U6 snRNA 3'-end processing IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0043628 ncRNA 3'-end processing IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR031968 VASt 2 155
IPR013584 RAP 520 581
IPR004333 SBP_dom 581 653
No external refs found!