lcl|LHPG02000011.1_cds_PRW45739.1_1293 (PRW45739)


Aliases : PRW45739

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45739.1_1293
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.66 tig00000057_g89.t1 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre16.g674500 30777234 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0379s00011.1 33191214 ABC transporter-like; ABC-2 family transporter protein... 0.02 OrthoFinder
PTI_18G02470.1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Vocar.0057s0009.1 32894713 ABC transporter-like; ABC-2 family transporter protein... 0.02 OrthoFinder
XM_002508234.1 MICPUN_84561, 84561 ATP-binding cassette superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019310 inositol catabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0050113 inositol oxygenase activity IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1765 1898
IPR003439 ABC_transporter-like_ATP-bd 674 821
No external refs found!