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  5. lcl|LHPG02000011.1_cds_PRW45558.1_1248

lcl|LHPG02000011.1_cds_PRW45558.1_1248 (PRW45558)


Aliases : PRW45558

Description : Proteasome subunit alpha type-4


Gene families : OG_01_0003437 (OrthoFinder) Phylogenetic Tree(s): OG0003437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45558.1_1248
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.21 tig00020965_g16836.t1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder
Cpa|evm.model.tig00021579.7 tig00021579_g22430.t1 No description available 0.01 OrthoFinder
Cre10.g418100 30789792, POA3 Protein degradation.26S proteasome.20S core... 0.11 OrthoFinder
Cz12g21180.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
PTI_01G02920.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.06 OrthoFinder
Sro495_g154380.1 Contig3243.g25618 Proteasome subunit alpha type 0.06 OrthoFinder
SymbC1.scaffold12258.1 12258.1 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
TP04G07880.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.06 OrthoFinder
Transcript_contig_55753 55753 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder
Vocar.0016s0001.1 32898033 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0018196 peptidyl-asparagine modification IEP Enrichment
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 5 193
No external refs found!