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Aliases : PRW45524
Description : Something about silencing 10
Gene families : OG_01_0002261 (OrthoFinder) Phylogenetic Tree(s): OG0002261_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000011.1_cds_PRW45524.1_1307 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00022075.45 | tig00022075_g23606.t1 | No description available | 0.06 | OrthoFinder | |
| Cre09.g394399 | 30780529 | No description available | 0.29 | OrthoFinder | |
| Cz16g17190.t1 | No alias | Sas10 C-terminal domain [Interproscan]. | 0.09 | OrthoFinder | |
| Cz16g17200.t1 | No alias | Sas10/Utp3/C1D [Interproscan]. | 0.13 | OrthoFinder | |
| EOD14890 | No alias | Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. | 0.13 | OrthoFinder | |
| OT_02G03770.1 | No alias | Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. | 0.21 | OrthoFinder | |
| PTI_01G09370.1 | No alias | Sas10 C-terminal domain [Interproscan]. | 0.16 | OrthoFinder | |
| PTI_04G05740.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| Sro408_g136920.1 | Contig3193.g25227 | About silencing protein 10 | 0.24 | OrthoFinder | |
| Sro98_g050440.1 | Contig3362.g26336 | Inherit from NOG: Neuroguidin, EIF4E binding protein | 0.07 | OrthoFinder | |
| TP03G07600.1 | No alias | Sas10/Utp3/C1D [Interproscan]. | 0.12 | OrthoFinder | |
| TP14G02810.1 | No alias | Sas10 C-terminal domain [Interproscan]. | 0.09 | OrthoFinder | |
| Vocar.0009s0185.1 | 32893539 | Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002502780.1 | MICPUN_59233, 59233 | Sas10 C-terminal domain; Sas10/Utp3/C1D [Interproscan]. | 0.18 | OrthoFinder | |
| XM_003060898.1 | MicpuC2_60704, 60704 | Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. | 0.11 | OrthoFinder | |
| lcl|BLLF01001084.1_cds_GFH17015.1_11492 | HaLaN_13548, GFH17015 | Sas10 domain-containing protein | 0.08 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497949.1_6902 | KAA8497949 | Neuroguidin | 0.13 | OrthoFinder | |
| lcl|VRMN01000009.1_cds_KAA8492404.1_9097 | KAA8492404 | Something about silencing protein 10 | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004055 | argininosuccinate synthase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0005319 | lipid transporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006525 | arginine metabolic process | IEP | Enrichment |
| BP | GO:0006526 | arginine biosynthetic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006869 | lipid transport | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| CC | GO:0034457 | Mpp10 complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0042255 | ribosome assembly | IEP | Enrichment |
| BP | GO:0042256 | mature ribosome assembly | IEP | Enrichment |
| BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Enrichment |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
| MF | GO:0043022 | ribosome binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0061024 | membrane organization | IEP | Enrichment |
| BP | GO:0070925 | organelle assembly | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Enrichment |
| MF | GO:0120013 | lipid transfer activity | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |