Aliases : PRW45504
Description : TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a isoform B
Gene families : OG_01_0003347 (OrthoFinder) Phylogenetic Tree(s): OG0003347_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000011.1_cds_PRW45504.1_1449 | |
Cluster | HCCA: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre05.g244236 | 30783167 | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder | |
Cz08g16110.t1 | No alias | tRNA (1-methyladenosine) methyltransferase catalytic... | 0.02 | OrthoFinder | |
Transcript_contig_56406 | 56406 | tRNA (1-methyladenosine) methyltransferase catalytic... | 0.02 | OrthoFinder | |
XM_002506202.1 | MICPUN_88116, 88116 | tRNA (1-methyladenosine) methyltransferase catalytic... | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEA | Interproscan |
BP | GO:0030488 | tRNA methylation | IEA | Interproscan |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Enrichment |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004518 | nuclease activity | IEP | Enrichment |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Enrichment |
MF | GO:0043177 | organic acid binding | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR014816 | tRNA_MeTrfase_Gcd14 | 40 | 252 |
No external refs found! |