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  5. lcl|LHPG02000011.1_cds_PRW45503.1_1448

lcl|LHPG02000011.1_cds_PRW45503.1_1448 (PRW45503)


Aliases : PRW45503

Description : TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a isoform A


Gene families : OG_01_0003347 (OrthoFinder) Phylogenetic Tree(s): OG0003347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45503.1_1448
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre05.g244236 30783167 RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder
Cz08g16110.t1 No alias tRNA (1-methyladenosine) methyltransferase catalytic... 0.02 OrthoFinder
Transcript_contig_56406 56406 tRNA (1-methyladenosine) methyltransferase catalytic... 0.02 OrthoFinder
XM_002506202.1 MICPUN_88116, 88116 tRNA (1-methyladenosine) methyltransferase catalytic... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEA Interproscan
BP GO:0030488 tRNA methylation IEA Interproscan
CC GO:0031515 tRNA (m1A) methyltransferase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042274 ribosomal small subunit biogenesis IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR014816 tRNA_MeTrfase_Gcd14 40 252
No external refs found!