- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRW45491
Description : 40S ribosomal S27
Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000011.1_cds_PRW45491.1_1276 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz01g18100.t1 | No alias | Sde2, N-terminal ubiquitin domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD12530 | No alias | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_90271 | 90271 | Ubiquitin-like domain [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0009s0373.1 | 32893174 | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01002210.1_cds_GFH23181.1_17658 | HaLaN_20757, GFH23181 | Cytoplasmic ribosomal protein 79 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Enrichment |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Enrichment |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Enrichment |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| MF | GO:0008252 | nucleotidase activity | IEP | Enrichment |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | Enrichment |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009264 | deoxyribonucleotide catabolic process | IEP | Enrichment |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Enrichment |
| CC | GO:0016459 | myosin complex | IEP | Enrichment |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Enrichment |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0036260 | RNA capping | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| MF | GO:0061134 | peptidase regulator activity | IEP | Enrichment |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000626 | Ubiquitin-like_dom | 3 | 74 |
| No external refs found! |