1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000011.1_cds_PRW45484.1_1348

lcl|LHPG02000011.1_cds_PRW45484.1_1348 (PRW45484)


Aliases : PRW45484

Description : 40S ribosomal S14-2


Gene families : OG_01_0004154 (OrthoFinder) Phylogenetic Tree(s): OG0004154_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45484.1_1348
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001154.44 tig00001154_g7308.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cre11.g480150 30775525, RPS14 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Cz12g21160.t1 No alias Ribosomal protein S11 [Interproscan]. 0.03 OrthoFinder
OT_02G02980.1 No alias Ribosomal protein S11 [Interproscan]. 0.07 OrthoFinder
PTI_07G00350.1 No alias Ribosomal protein S11 [Interproscan]. 0.05 OrthoFinder
Sro1286_g259390.1 Contig2537.g20698 40S ribosomal protein S14 0.05 OrthoFinder
Vocar.0048s0023.1 32893648 Ribosomal protein S11 [Interproscan]. 0.03 OrthoFinder
XM_002507445.1 MICPUN_113929, 113929 Ribosomal protein S14 (RPS14) 0.03 OrthoFinder
lcl|BLLF01000375.1_cds_GFH11112.1_5589 HaLaN_06553, GFH11112 Ribosomal protein 0.05 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496975.1_704 KAA8496975 40S ribosomal protein S14 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 27 145
No external refs found!