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  5. lcl|LHPG02000011.1_cds_PRW45473.1_1500

lcl|LHPG02000011.1_cds_PRW45473.1_1500 (PRW45473)


Aliases : PRW45473

Description : Autophagy-related 16


Gene families : OG_01_0007850 (OrthoFinder) Phylogenetic Tree(s): OG0007850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45473.1_1500
Cluster HCCA: Cluster_86


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
InterPro domains Description Start Stop
IPR013923 Autophagy-rel_prot_16 224 382
IPR001680 WD40_repeat 676 701
IPR001680 WD40_repeat 492 525
IPR001680 WD40_repeat 584 610
IPR001680 WD40_repeat 531 568
IPR001680 WD40_repeat 448 484
No external refs found!