Aliases : PRW45465
Description : Pseudouridine synthase
Gene families : OG_01_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000011.1_cds_PRW45465.1_1305 | |
Cluster | HCCA: Cluster_74 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PTI_09G02460.1 | No alias | Pseudouridine synthase, RsuA/RluA [Interproscan]. | 0.02 | OrthoFinder | |
XM_002500429.1 | MICPUN_56859, 56859 | Pseudouridine synthase, RsuA/RluA [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Enrichment |
MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
MF | GO:0005253 | anion channel activity | IEP | Enrichment |
MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
BP | GO:0006821 | chloride transport | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
MF | GO:0015267 | channel activity | IEP | Enrichment |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006145 | PsdUridine_synth_RsuA/RluA | 285 | 456 |
No external refs found! |