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  5. lcl|LHPG02000011.1_cds_PRW45456.1_1487

lcl|LHPG02000011.1_cds_PRW45456.1_1487 (PRW45456)


Aliases : PRW45456

Description : MRNA export shuttling


Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45456.1_1487
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
TP06G01910.1 No alias U box domain [Interproscan]. 0.02 OrthoFinder
XM_002507351.1 MICPUN_55612, 55612 U box domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008818 cobalamin 5'-phosphate synthase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 558 616
IPR000504 RRM_dom 669 724
IPR000504 RRM_dom 318 374
IPR000504 RRM_dom 218 276
No external refs found!