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  5. lcl|LHPG02000011.1_cds_PRW45440.1_1444

lcl|LHPG02000011.1_cds_PRW45440.1_1444 (PRW45440)


Aliases : PRW45440

Description : UPF0187 chloroplastic


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45440.1_1444
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
EOD15023 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59797 59797 Hypothetical protein 0.02 OrthoFinder
Vocar.0039s0076.1 32897751 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 77 312
No external refs found!