lcl|LHPG02000011.1_cds_PRW45383.1_1250 (PRW45383)

Aliases : PRW45383

Description : ATP-dependent RNA helicase dhx8 isoform A

Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000011.1_cds_PRW45383.1_1250
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
Cz12g28100.t1	No alias	Helicase, C-terminal; Domain of unknown function...	0.03	OrthoFinder
Cz14g08150.t1	No alias	Helicase, C-terminal; Domain of unknown function...	0.02	OrthoFinder
EOD22735	No alias	Helicase-associated domain; DEAD/DEAH box helicase...	0.02	OrthoFinder
OT_08G03320.1	No alias	Helicase-associated domain; Helicase, C-terminal; Domain...	0.04	OrthoFinder
Vocar.0017s0041.1	32891358	Domain of unknown function DUF1605; Helicase,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATPase, acting on DNA	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	Enrichment
BP	GO:0005991	trehalose metabolic process	IEP	Enrichment
BP	GO:0005992	trehalose biosynthetic process	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Enrichment
BP	GO:0046351	disaccharide biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	436	525
IPR011545	DEAD/DEAH_box_helicase_dom	50	199
IPR001650	Helicase_C	242	373
IPR011709	DUF1605	587	664

External Links

No external refs found!