1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000011.1_cds_PRW45336.1_1274

lcl|LHPG02000011.1_cds_PRW45336.1_1274 (PRW45336)


Aliases : PRW45336

Description : E3 ubiquitin-ligase SDIR1 isoform X1


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45336.1_1274
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.76 tig00021127_g18753.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.01 OrthoFinder
lcl|BLLF01001468.1_cds_GFH19468.1_13945 HaLaN_16418, GFH19468 RING-type domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 344 388
No external refs found!