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  5. lcl|LHPG02000011.1_cds_PRW45325.1_1437

lcl|LHPG02000011.1_cds_PRW45325.1_1437 (PRW45325)


Aliases : PRW45325

Description : Subunit of the chloroplast cytochrome b6f complex


Gene families : OG_01_0005430 (OrthoFinder) Phylogenetic Tree(s): OG0005430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45325.1_1437
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre16.g650100 30778201, PETN Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder
Cz16g12040.t1 No alias Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.17 OrthoFinder
OT_12G00550.1 No alias Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.03 OrthoFinder
Vocar.0032s0139.1 32893855 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.14 OrthoFinder
XM_002503114.1 MICPUN_94459, 94459 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.04 OrthoFinder
XM_003061127.1 MicpuC2_63318, 63318 Cytochrome b6-f complex subunit (PetN) 0.1 OrthoFinder
lcl|BLLF01000018.1_cds_GFH05996.1_473 HaLaN_00551, GFH05996 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.09 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005497 Cytochrome_b6-f_cplx_su8 74 100
No external refs found!